io.github.marcorusc/NeKodatabases

NeKo Biological Network Builder

Verified · 4 days ago

MCP server for biological network construction and analysis using pathway databases

Install

claude mcp add NeKo -- uvx mcp-biomodelling-servers

Our take

A research-grade MCP server for building and analyzing biological networks from pathway databases, part of a multi-server bio-modelling repo (NeKo, MaBoSS, PhysiCell/PhysiBoSS). The NeKo subfolder holds a real server.py plus session manager and utils; installed via uvx with a --from selector against the mcp-biomodelling-servers PyPI package. Genuinely niche academic tooling from an established researcher; small audience by nature.

reviewed by hand · 2026-07-06

Something wrong or dead here? Report it

Verification record

last verified
4 days ago
github stars
18
last commit
7 days ago
archived
no
in registry since
2026-04-16

github.com/marcorusc/mcp-biomodelling-servers

Metabase

Verified · 4 days ago

Lets AI clients search, explore, query, and visualize data in a Metabase instance.

hand-reviewed49k starschecked 4 days ago

genai-toolboxdatabases

MCP Toolbox for Databases

Verified · 21 days ago

MCP Toolbox for Databases enables your agent to connect to your database.

hand-reviewed16k starschecked 21 days ago

mcp-toolboxdatabases

MCP Toolbox for Databases

Verified · 21 days ago

MCP Toolbox for Databases enables your agent to connect to your database.

hand-reviewed16k starschecked 21 days ago

dbx

Verified · 22 days ago

Query databases from AI agents using connections configured in DBX.

hand-reviewed12k stars5.9k dl/wkchecked 22 days ago

mcp

Verified · 19 days ago

Real-time Kubernetes network traffic visibility and API analysis for HTTP, gRPC, Redis, Kafka, DNS.

hand-reviewed12k starschecked 19 days ago

DBHub

Verified · 6 days ago

Minimal, token-efficient Database MCP Server for PostgreSQL, MySQL, SQL Server, SQLite, MariaDB

hand-reviewed3.4k stars23k dl/wkchecked 6 days ago